The SubstitutionMatrix type exposes the following members.
Constructors
| Name | Description | |
|---|---|---|
 | SubstitutionMatrix |
Construct a substitution matrix from a string representation.
|
Methods
| Name | Description | |
|---|---|---|
| Equals | (Inherited from Object.) |
 | Finalize |
Allows an Object to attempt to free resources and perform other cleanup operations before the Object is reclaimed by garbage collection.
(Inherited from Object.) |
| GetHashCode |
Serves as a hash function for a particular type.
(Inherited from Object.) |
| GetType |
Gets the Type of the current instance.
(Inherited from Object.) |
| GetValueAt |
Fetch the value of a substitution from the matrix, given the row and column symbols.
|
| MemberwiseClone |
Creates a shallow copy of the current Object.
(Inherited from Object.) |
| ParseMatrix |
Reads a String representing the contents of a substitution matrix file.
|
| ToString | (Inherited from Object.) |
Fields
| Name | Description | |
|---|---|---|
 | alphabet |
The alphabet for the symbols used by the matrix.
|
| colSymbols |
Symbol column index mapping.
|
| matrix |
The actual matrix.
|
| max |
The maximum value in the matrix.
|
| min |
The minimum value in the matrix.
|
| name |
The name of the matrix.
|
| rowSymbols |
Symbol to row index mapping.
|
Properties
| Name | Description | |
|---|---|---|
 | Alphabet |
Gives the alphabet used by this matrix.
|
| Description |
The description of the matrix.
|
