The SubstitutionMatrix type exposes the following members.

Constructors

  NameDescription
SubstitutionMatrix
Construct a substitution matrix from a string representation.

Methods

  NameDescription
Equals
Determines whether the specified Object is equal to the current Object.
(Inherited from Object.)
Finalize
Allows an Object to attempt to free resources and perform other cleanup operations before the Object is reclaimed by garbage collection.
(Inherited from Object.)
GetHashCode
Serves as a hash function for a particular type.
(Inherited from Object.)
GetType
Gets the Type of the current instance.
(Inherited from Object.)
GetValueAt
Fetch the value of a substitution from the matrix, given the row and column symbols.
MemberwiseClone
Creates a shallow copy of the current Object.
(Inherited from Object.)
ParseMatrix
Reads a String representing the contents of a substitution matrix file.
ToString
Returns a String that represents the current Object.
(Inherited from Object.)

Fields

  NameDescription
alphabet
The alphabet for the symbols used by the matrix.
colSymbols
Symbol column index mapping.
matrix
The actual matrix.
max
The maximum value in the matrix.
min
The minimum value in the matrix.
name
The name of the matrix.
rowSymbols
Symbol to row index mapping.

Properties

  NameDescription
Alphabet
Gives the alphabet used by this matrix.
Description
The description of the matrix.

See Also